Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data
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STAR Protocols is an open access, peer-reviewed journal from Cell Press. We offer structured, transparent, accessible, and repeatable step-by-step experimental and computational protocols from all areas of life, health, earth and physical sciences.
![Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data](https://europepmc.org/articles/PMC8551421/bin/gr5.jpg)
Fast two-stage phasing of large-scale sequence data. - Abstract
![Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data](https://www.biorxiv.org/content/biorxiv/early/2022/04/07/2022.04.05.487133/F3.large.jpg)
Fragmented habitat compensates for the adverse effects of genetic
![Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data](https://media.springernature.com/m685/springer-static/image/art%3A10.1038%2Fs41437-021-00438-5/MediaObjects/41437_2021_438_Fig2_HTML.png)
Whole genome sequencing reveals high differentiation, low levels
![Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data](https://www.mdpi.com/animals/animals-11-02381/article_deploy/html/images/animals-11-02381-g004.png)
Animals, Free Full-Text
![Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data](https://i1.rgstatic.net/ii/profile.image/359086139953152-1462624215146_Q64/Anders-Krabberod.jpg)
PDF) A protocol for applying a population-specific reference genome assembly to population genetics and medical studies
Main haul-out sites of male Saimaa seal, Sulevi. (1) Movements 15
![Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data](https://www.frontiersin.org/files/Articles/826746/fmed-09-826746-HTML/image_m/fmed-09-826746-g001.jpg)
Frontiers Population Genomics Approaches for Genetic
![Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data](https://www.researchgate.net/profile/Heikki-Hyvaerinen-2/publication/228825079/figure/fig3/AS:671535828303874@1537118026068/Main-haul-out-sites-and-living-area-of-translocated-Saimaa-seal-female-Venla-in-1992-and_Q320.jpg)
PDF) Movements and use of haul-out sites of radio-tagged Saimaa ringed seal (Phoca hispida saimensis Nordq.) during the open-water season
![Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data](https://www.frontiersin.org/files/MyHome%20Article%20Library/1006719/1006719_Thumb_400.jpg)
Frontiers Genetic diversity and population structure assessment
![Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data](https://www.biorxiv.org/content/biorxiv/early/2022/09/01/2022.04.05.487133/F6.large.jpg)
Fragmented habitat compensates for the adverse effects of genetic
![Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data](https://www.researchgate.net/publication/296485957/figure/fig4/AS:668585219338248@1536414546437/An-example-of-ringed-seal-migration-sample-sites-for-genetic-analysis-and-geographic.jpg)
An example of ringed seal migration, sample sites for genetic
![Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data](https://i1.rgstatic.net/ii/profile.image/684803607257091-1540281311193_Q64/Meeri-Koivuniemi.jpg)
PDF) Movements and use of haul-out sites of radio-tagged Saimaa ringed seal (Phoca hispida saimensis Nordq.) during the open-water season
![Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data](https://europepmc.org/articles/PMC8551421/bin/gr1.jpg)
Fast two-stage phasing of large-scale sequence data. - Abstract
![Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data](https://www.researchgate.net/profile/Todd-Castoe/publication/51855905/figure/fig6/AS:339862977826818@1458041056192/Principles-of-repeat-identification-using-P-clouds-A-True-data-distribution_Q320.jpg)
Principles of repeat identification using P-clouds. A) True data
![Analysis of population structure and genetic diversity in low-variance Saimaa ringed seals using low-coverage whole-genome sequence data](https://www.biorxiv.org/content/biorxiv/early/2022/09/01/2022.04.05.487133/F10.large.jpg)
Fragmented habitat compensates for the adverse effects of genetic
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